Cluster: Rep_2157_CGC36
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2157
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2157_c_0 | Rep_2157_c_0_2729 | 3004683 | 3006212 | - | 3.A.1.121.2 |
| pfam | Rep_2157_c_0 | Rep_2157_c_0_2730 | 3006773 | 3006940 | - | Phage_integrase |
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_2731 | 3007134 | 3007898 | - | GH166 |
Gene ID: Rep_2157_c_0_2729
Type: TC
Location: 3004683 - 3006212 (-)
Type: TC
Location: 3004683 - 3006212 (-)
Gene ID: Rep_2157_c_0_2730
Type: pfam
Location: 3006773 - 3006940 (-)
Type: pfam
Location: 3006773 - 3006940 (-)
Gene ID: Rep_2157_c_0_2731
Type: CAZyme
Location: 3007134 - 3007898 (-)
Type: CAZyme
Location: 3007134 - 3007898 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| Rep_2157_c_0_2729 | vegetarian > vegan | 1.46229 | 0.02401 |
| Rep_2157_c_0_2731 | vegetarian > omnivore | 1.08929 | 0.03198 |