Cluster: Rep_2157_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2157
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2157_c_0 | Rep_2157_c_0_2590 | 2846349 | 2847887 | - | 2.A.22.5.3 |
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_2591 | 2848439 | 2850031 | + | GH13_44 |
| pfam | Rep_2157_c_0 | Rep_2157_c_0_2592 | 2850273 | 2851583 | + | Aldedh |
| TC | Rep_2157_c_0 | Rep_2157_c_0_2593 | 2851670 | 2853811 | + | 9.B.74.1.1 |
| NULL(UNKNOWN) | Rep_2157_c_0 | Rep_2157_c_0_2594 | 2853833 | 2854429 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2157_c_0 | Rep_2157_c_0_2595 | 2854426 | 2856543 | + | 9.B.74.1.1 |
Gene ID: Rep_2157_c_0_2590
Type: TC
Location: 2846349 - 2847887 (-)
Type: TC
Location: 2846349 - 2847887 (-)
Gene ID: Rep_2157_c_0_2591
Type: CAZyme
Location: 2848439 - 2850031 (+)
Type: CAZyme
Location: 2848439 - 2850031 (+)
Gene ID: Rep_2157_c_0_2592
Type: pfam
Location: 2850273 - 2851583 (+)
Type: pfam
Location: 2850273 - 2851583 (+)
Gene ID: Rep_2157_c_0_2593
Type: TC
Location: 2851670 - 2853811 (+)
Type: TC
Location: 2851670 - 2853811 (+)
Gene ID: Rep_2157_c_0_2594
Type:
Location: 2853833 - 2854429 (+)
Type:
Location: 2853833 - 2854429 (+)
Gene ID: Rep_2157_c_0_2595
Type: TC
Location: 2854426 - 2856543 (+)
Type: TC
Location: 2854426 - 2856543 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.