Cluster: Rep_2157_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2157
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2157_c_0 | Rep_2157_c_0_173 | 221123 | 222841 | + | 2.A.25.1.3 |
| TC | Rep_2157_c_0 | Rep_2157_c_0_174 | 223046 | 224806 | + | 1.A.33.1.4 |
| NULL(UNKNOWN) | Rep_2157_c_0 | Rep_2157_c_0_175 | 224832 | 225227 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2157_c_0 | Rep_2157_c_0_176 | 225282 | 226181 | + | 1.E.12.1.3 |
| pfam | Rep_2157_c_0 | Rep_2157_c_0_177 | 226185 | 226994 | + | DnaJ |
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_178 | 227290 | 229737 | + | GT35 |
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_179 | 229892 | 230968 | + | GH5_2 |
Gene ID: Rep_2157_c_0_173
Type: TC
Location: 221123 - 222841 (+)
Type: TC
Location: 221123 - 222841 (+)
Gene ID: Rep_2157_c_0_174
Type: TC
Location: 223046 - 224806 (+)
Type: TC
Location: 223046 - 224806 (+)
Gene ID: Rep_2157_c_0_175
Type:
Location: 224832 - 225227 (+)
Type:
Location: 224832 - 225227 (+)
Gene ID: Rep_2157_c_0_176
Type: TC
Location: 225282 - 226181 (+)
Type: TC
Location: 225282 - 226181 (+)
Gene ID: Rep_2157_c_0_177
Type: pfam
Location: 226185 - 226994 (+)
Type: pfam
Location: 226185 - 226994 (+)
Gene ID: Rep_2157_c_0_178
Type: CAZyme
Location: 227290 - 229737 (+)
Type: CAZyme
Location: 227290 - 229737 (+)
Gene ID: Rep_2157_c_0_179
Type: CAZyme
Location: 229892 - 230968 (+)
Type: CAZyme
Location: 229892 - 230968 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.