Cluster: Rep_2157_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2157
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_2163 | 2428601 | 2430430 | - | GH13_36 |
| pfam | Rep_2157_c_0 | Rep_2157_c_0_2164 | 2430503 | 2431663 | - | ABC2_membrane | ABC2_membrane_3 |
| pfam | Rep_2157_c_0 | Rep_2157_c_0_2165 | 2431650 | 2432813 | - | ABC2_membrane_3 |
| TC | Rep_2157_c_0 | Rep_2157_c_0_2166 | 2432899 | 2433846 | - | 3.A.1.105.7 |
Gene ID: Rep_2157_c_0_2163
Type: CAZyme
Location: 2428601 - 2430430 (-)
Type: CAZyme
Location: 2428601 - 2430430 (-)
Gene ID: Rep_2157_c_0_2164
Type: pfam
Location: 2430503 - 2431663 (-)
Type: pfam
Location: 2430503 - 2431663 (-)
Gene ID: Rep_2157_c_0_2165
Type: pfam
Location: 2431650 - 2432813 (-)
Type: pfam
Location: 2431650 - 2432813 (-)
Gene ID: Rep_2157_c_0_2166
Type: TC
Location: 2432899 - 2433846 (-)
Type: TC
Location: 2432899 - 2433846 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.