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Cluster: Rep_2157_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2157_c_0 Rep_2157_c_0_2081 2336321 2339044 + GT51
pfam Rep_2157_c_0 Rep_2157_c_0_2082 2339109 2339465 - SpoVAC_SpoVAEB
TC Rep_2157_c_0 Rep_2157_c_0_2083 2339472 2340497 - 9.A.11.1.1
TC Rep_2157_c_0 Rep_2157_c_0_2084 2340663 2342018 + 2.A.49.9.2
pfam Rep_2157_c_0 Rep_2157_c_0_2085 2342026 2343759 - VanW | G5
pfam Rep_2157_c_0 Rep_2157_c_0_2086 2343760 2344140 - DUF3783
TC Rep_2157_c_0 Rep_2157_c_0_2087 2344260 2344709 - 9.A.11.1.1
TC Rep_2157_c_0 Rep_2157_c_0_2088 2344750 2345166 - 9.A.11.1.1
TC Rep_2157_c_0 Rep_2157_c_0_2089 2345156 2345779 - 9.A.11.1.1
Gene ID: Rep_2157_c_0_2081
Type: CAZyme
Location: 2336321 - 2339044 (+)
Gene ID: Rep_2157_c_0_2082
Type: pfam
Location: 2339109 - 2339465 (-)
Gene ID: Rep_2157_c_0_2083
Type: TC
Location: 2339472 - 2340497 (-)
Gene ID: Rep_2157_c_0_2084
Type: TC
Location: 2340663 - 2342018 (+)
Gene ID: Rep_2157_c_0_2085
Type: pfam
Location: 2342026 - 2343759 (-)
Gene ID: Rep_2157_c_0_2086
Type: pfam
Location: 2343760 - 2344140 (-)
Gene ID: Rep_2157_c_0_2087
Type: TC
Location: 2344260 - 2344709 (-)
Gene ID: Rep_2157_c_0_2088
Type: TC
Location: 2344750 - 2345166 (-)
Gene ID: Rep_2157_c_0_2089
Type: TC
Location: 2345156 - 2345779 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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