Cluster: Rep_2157_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2157
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2157_c_0 | Rep_2157_c_0_1686 | 1889686 | 1890105 | - | 1.A.22.1.8 |
| pfam | Rep_2157_c_0 | Rep_2157_c_0_1687 | 1890251 | 1891795 | - | Phosphodiest | Metalloenzyme | iPGM_N |
| pfam | Rep_2157_c_0 | Rep_2157_c_0_1688 | 1891905 | 1892678 | - | Exo_endo_phos |
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_1689 | 1892936 | 1896571 | - | CBM4 | CBM4 | CBM4 | GH16_3 |
Gene ID: Rep_2157_c_0_1686
Type: TC
Location: 1889686 - 1890105 (-)
Type: TC
Location: 1889686 - 1890105 (-)
Gene ID: Rep_2157_c_0_1687
Type: pfam
Location: 1890251 - 1891795 (-)
Type: pfam
Location: 1890251 - 1891795 (-)
Gene ID: Rep_2157_c_0_1688
Type: pfam
Location: 1891905 - 1892678 (-)
Type: pfam
Location: 1891905 - 1892678 (-)
Gene ID: Rep_2157_c_0_1689
Type: CAZyme
Location: 1892936 - 1896571 (-)
Type: CAZyme
Location: 1892936 - 1896571 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.