Cluster: Rep_2157_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2157
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_1516 | 1697665 | 1700067 | + | GH94 |
| peptidase | Rep_2157_c_0 | Rep_2157_c_0_1517 | 1700180 | 1700836 | + | S14.UPW |
| pfam | Rep_2157_c_0 | Rep_2157_c_0_1518 | 1700896 | 1701777 | + | BacA |
| TC | Rep_2157_c_0 | Rep_2157_c_0_1519 | 1701799 | 1704696 | + | 3.A.12.1.1 |
Gene ID: Rep_2157_c_0_1516
Type: CAZyme
Location: 1697665 - 1700067 (+)
Type: CAZyme
Location: 1697665 - 1700067 (+)
Gene ID: Rep_2157_c_0_1517
Type: peptidase
Location: 1700180 - 1700836 (+)
Type: peptidase
Location: 1700180 - 1700836 (+)
Gene ID: Rep_2157_c_0_1518
Type: pfam
Location: 1700896 - 1701777 (+)
Type: pfam
Location: 1700896 - 1701777 (+)
Gene ID: Rep_2157_c_0_1519
Type: TC
Location: 1701799 - 1704696 (+)
Type: TC
Location: 1701799 - 1704696 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.