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Cluster: Rep_2157_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2157_c_0 Rep_2157_c_0_163 201485 202252 - 9.B.28.1.2
STP Rep_2157_c_0 Rep_2157_c_0_164 202604 203905 + SBP_bac_1
TC Rep_2157_c_0 Rep_2157_c_0_165 204021 205007 + 3.A.1.1.17
TC Rep_2157_c_0 Rep_2157_c_0_166 205023 205865 + 3.A.1.1.36
NULL(UNKNOWN) Rep_2157_c_0 Rep_2157_c_0_167 206028 206732 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2157_c_0 Rep_2157_c_0_168 206806 208998 + GH36
Gene ID: Rep_2157_c_0_163
Type: TC
Location: 201485 - 202252 (-)
Gene ID: Rep_2157_c_0_164
Type: STP
Location: 202604 - 203905 (+)
Gene ID: Rep_2157_c_0_165
Type: TC
Location: 204021 - 205007 (+)
Gene ID: Rep_2157_c_0_166
Type: TC
Location: 205023 - 205865 (+)
Gene ID: Rep_2157_c_0_167
Type:
Location: 206028 - 206732 (+)
Gene ID: Rep_2157_c_0_168
Type: CAZyme
Location: 206806 - 208998 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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