Cluster: Rep_2157_CGC19
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2157
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2157_c_0 | Rep_2157_c_0_1454 | 1621093 | 1626450 | + | GH9 |
| TF | Rep_2157_c_0 | Rep_2157_c_0_1455 | 1626624 | 1627085 | + | MarR |
| TC | Rep_2157_c_0 | Rep_2157_c_0_1456 | 1627082 | 1627777 | + | 2.A.115.2.8 |
Gene ID: Rep_2157_c_0_1454
Type: CAZyme
Location: 1621093 - 1626450 (+)
Type: CAZyme
Location: 1621093 - 1626450 (+)
Gene ID: Rep_2157_c_0_1455
Type: TF
Location: 1626624 - 1627085 (+)
Type: TF
Location: 1626624 - 1627085 (+)
Gene ID: Rep_2157_c_0_1456
Type: TC
Location: 1627082 - 1627777 (+)
Type: TC
Location: 1627082 - 1627777 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.