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Cluster: Rep_2157_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2157_c_0 Rep_2157_c_0_427 494269 495519 + GH3
pfam Rep_2157_c_0 Rep_2157_c_0_428 495643 496878 + ketoacyl-synt | Ketoacyl-synt_C
pfam Rep_2157_c_0 Rep_2157_c_0_429 497216 498565 + Aminotran_3
TC Rep_2157_c_0 Rep_2157_c_0_430 498592 500166 + 3.A.1.5.11
TC Rep_2157_c_0 Rep_2157_c_0_431 500255 501184 + 3.A.1.5.11
TC Rep_2157_c_0 Rep_2157_c_0_432 501187 502044 + 3.A.1.5.27
TC Rep_2157_c_0 Rep_2157_c_0_433 502057 503082 + 3.A.1.5.35
TC Rep_2157_c_0 Rep_2157_c_0_434 503027 504070 + 3.A.1.5.29
TC Rep_2157_c_0 Rep_2157_c_0_435 504093 505787 + 1.A.11.2.7
Gene ID: Rep_2157_c_0_427
Type: CAZyme
Location: 494269 - 495519 (+)
Gene ID: Rep_2157_c_0_428
Type: pfam
Location: 495643 - 496878 (+)
Gene ID: Rep_2157_c_0_429
Type: pfam
Location: 497216 - 498565 (+)
Gene ID: Rep_2157_c_0_430
Type: TC
Location: 498592 - 500166 (+)
Gene ID: Rep_2157_c_0_431
Type: TC
Location: 500255 - 501184 (+)
Gene ID: Rep_2157_c_0_432
Type: TC
Location: 501187 - 502044 (+)
Gene ID: Rep_2157_c_0_433
Type: TC
Location: 502057 - 503082 (+)
Gene ID: Rep_2157_c_0_434
Type: TC
Location: 503027 - 504070 (+)
Gene ID: Rep_2157_c_0_435
Type: TC
Location: 504093 - 505787 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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