Cluster: Rep_2156_CGC35
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2156
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2156_c_17 | Rep_2156_c_17_2 | 1224 | 2165 | - | GH26 |
| TF | Rep_2156_c_17 | Rep_2156_c_17_3 | 2302 | 3153 | + | HTH_AraC | HTH_AraC |
| TC | Rep_2156_c_17 | Rep_2156_c_17_4 | 3225 | 4625 | - | 2.A.66.1.33 |
Gene ID: Rep_2156_c_17_2
Type: CAZyme
Location: 1224 - 2165 (-)
Type: CAZyme
Location: 1224 - 2165 (-)
Gene ID: Rep_2156_c_17_3
Type: TF
Location: 2302 - 3153 (+)
Type: TF
Location: 2302 - 3153 (+)
Gene ID: Rep_2156_c_17_4
Type: TC
Location: 3225 - 4625 (-)
Type: TC
Location: 3225 - 4625 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900548215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.