Cluster: Rep_2156_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2156
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2156_c_11 | Rep_2156_c_11_41 | 49770 | 51719 | + | 3.A.16.1.1 |
| pfam | Rep_2156_c_11 | Rep_2156_c_11_42 | 51932 | 53281 | + | DUF676 |
| CAZyme | Rep_2156_c_11 | Rep_2156_c_11_43 | 53638 | 55731 | + | CBM34 | GH13_39 |
Gene ID: Rep_2156_c_11_41
Type: TC
Location: 49770 - 51719 (+)
Type: TC
Location: 49770 - 51719 (+)
Gene ID: Rep_2156_c_11_42
Type: pfam
Location: 51932 - 53281 (+)
Type: pfam
Location: 51932 - 53281 (+)
Gene ID: Rep_2156_c_11_43
Type: CAZyme
Location: 53638 - 55731 (+)
Type: CAZyme
Location: 53638 - 55731 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900548215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.