Cluster: Rep_2156_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2156
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2156_c_10 | Rep_2156_c_10_495 | 522427 | 523929 | - | 2.A.22.5.3 |
| CAZyme | Rep_2156_c_10 | Rep_2156_c_10_496 | 524557 | 526149 | + | GH13_44 |
| pfam | Rep_2156_c_10 | Rep_2156_c_10_497 | 526900 | 528264 | + | Aldedh |
| TC | Rep_2156_c_10 | Rep_2156_c_10_498 | 528367 | 530508 | + | 9.B.74.1.1 |
| NULL(UNKNOWN) | Rep_2156_c_10 | Rep_2156_c_10_499 | 530549 | 531202 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2156_c_10 | Rep_2156_c_10_500 | 531199 | 533316 | + | 9.B.74.1.1 |
Gene ID: Rep_2156_c_10_495
Type: TC
Location: 522427 - 523929 (-)
Type: TC
Location: 522427 - 523929 (-)
Gene ID: Rep_2156_c_10_496
Type: CAZyme
Location: 524557 - 526149 (+)
Type: CAZyme
Location: 524557 - 526149 (+)
Gene ID: Rep_2156_c_10_497
Type: pfam
Location: 526900 - 528264 (+)
Type: pfam
Location: 526900 - 528264 (+)
Gene ID: Rep_2156_c_10_498
Type: TC
Location: 528367 - 530508 (+)
Type: TC
Location: 528367 - 530508 (+)
Gene ID: Rep_2156_c_10_499
Type:
Location: 530549 - 531202 (+)
Type:
Location: 530549 - 531202 (+)
Gene ID: Rep_2156_c_10_500
Type: TC
Location: 531199 - 533316 (+)
Type: TC
Location: 531199 - 533316 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900548215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.