Cluster: Rep_2156_CGC20
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2156
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2156_c_10 | Rep_2156_c_10_362 | 405592 | 407091 | - | GH77 |
| TC | Rep_2156_c_10 | Rep_2156_c_10_363 | 407175 | 408068 | - | 3.A.1.1.45 |
| TC | Rep_2156_c_10 | Rep_2156_c_10_364 | 408068 | 409009 | - | 3.A.1.1.45 |
| TC | Rep_2156_c_10 | Rep_2156_c_10_365 | 409177 | 410514 | - | 3.A.1.1.45 |
Gene ID: Rep_2156_c_10_362
Type: CAZyme
Location: 405592 - 407091 (-)
Type: CAZyme
Location: 405592 - 407091 (-)
Gene ID: Rep_2156_c_10_363
Type: TC
Location: 407175 - 408068 (-)
Type: TC
Location: 407175 - 408068 (-)
Gene ID: Rep_2156_c_10_364
Type: TC
Location: 408068 - 409009 (-)
Type: TC
Location: 408068 - 409009 (-)
Gene ID: Rep_2156_c_10_365
Type: TC
Location: 409177 - 410514 (-)
Type: TC
Location: 409177 - 410514 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp900548215
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.