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Cluster: Rep_2156_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2156_c_10 Rep_2156_c_10_137 162508 165300 + GT51
pfam Rep_2156_c_10 Rep_2156_c_10_138 165350 165706 - SpoVAC_SpoVAEB
TC Rep_2156_c_10 Rep_2156_c_10_139 165787 166803 - 9.A.11.1.1
TC Rep_2156_c_10 Rep_2156_c_10_140 166975 168327 + 2.A.49.9.2
pfam Rep_2156_c_10 Rep_2156_c_10_141 168470 170197 - VanW
pfam Rep_2156_c_10 Rep_2156_c_10_142 170234 170614 - DUF3783
TC Rep_2156_c_10 Rep_2156_c_10_143 170750 171199 - 9.A.11.1.1
TC Rep_2156_c_10 Rep_2156_c_10_144 171285 171698 - 9.A.11.1.1
TC Rep_2156_c_10 Rep_2156_c_10_145 171688 172311 - 9.A.11.1.1
Gene ID: Rep_2156_c_10_137
Type: CAZyme
Location: 162508 - 165300 (+)
Gene ID: Rep_2156_c_10_138
Type: pfam
Location: 165350 - 165706 (-)
Gene ID: Rep_2156_c_10_139
Type: TC
Location: 165787 - 166803 (-)
Gene ID: Rep_2156_c_10_140
Type: TC
Location: 166975 - 168327 (+)
Gene ID: Rep_2156_c_10_141
Type: pfam
Location: 168470 - 170197 (-)
Gene ID: Rep_2156_c_10_142
Type: pfam
Location: 170234 - 170614 (-)
Gene ID: Rep_2156_c_10_143
Type: TC
Location: 170750 - 171199 (-)
Gene ID: Rep_2156_c_10_144
Type: TC
Location: 171285 - 171698 (-)
Gene ID: Rep_2156_c_10_145
Type: TC
Location: 171688 - 172311 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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