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Cluster: Rep_2156_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2156_c_9 Rep_2156_c_9_538 637988 638752 - 9.B.28.1.2
STP Rep_2156_c_9 Rep_2156_c_9_539 639135 640433 + SBP_bac_1
TC Rep_2156_c_9 Rep_2156_c_9_540 640549 641535 + 3.A.1.1.17
TC Rep_2156_c_9 Rep_2156_c_9_541 641551 642393 + 3.A.1.1.36
NULL(UNKNOWN) Rep_2156_c_9 Rep_2156_c_9_542 642704 643384 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2156_c_9 Rep_2156_c_9_543 643498 645690 + GH36
Gene ID: Rep_2156_c_9_538
Type: TC
Location: 637988 - 638752 (-)
Gene ID: Rep_2156_c_9_539
Type: STP
Location: 639135 - 640433 (+)
Gene ID: Rep_2156_c_9_540
Type: TC
Location: 640549 - 641535 (+)
Gene ID: Rep_2156_c_9_541
Type: TC
Location: 641551 - 642393 (+)
Gene ID: Rep_2156_c_9_542
Type:
Location: 642704 - 643384 (+)
Gene ID: Rep_2156_c_9_543
Type: CAZyme
Location: 643498 - 645690 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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