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Cluster: Rep_2155_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2155_c_0 Rep_2155_c_0_1250 1402489 1403472 - GT2
pfam Rep_2155_c_0 Rep_2155_c_0_1251 1403497 1403940 - Hexapep | Hexapep_2
CAZyme Rep_2155_c_0 Rep_2155_c_0_1252 1403963 1405072 - GT4
CAZyme Rep_2155_c_0 Rep_2155_c_0_1253 1405095 1405862 - GT2
pfam Rep_2155_c_0 Rep_2155_c_0_1254 1405883 1407130 - UDPG_MGDP_dh | NAD_Gly3P_dh_N | UDPG_MGDP_dh_C | UDPG_MGDP_dh_N
TC Rep_2155_c_0 Rep_2155_c_0_1255 1407291 1408766 - 9.B.18.1.2
TC Rep_2155_c_0 Rep_2155_c_0_1256 1409043 1410878 - 1.A.13.2.3
Gene ID: Rep_2155_c_0_1250
Type: CAZyme
Location: 1402489 - 1403472 (-)
Gene ID: Rep_2155_c_0_1251
Type: pfam
Location: 1403497 - 1403940 (-)
Gene ID: Rep_2155_c_0_1252
Type: CAZyme
Location: 1403963 - 1405072 (-)
Gene ID: Rep_2155_c_0_1253
Type: CAZyme
Location: 1405095 - 1405862 (-)
Gene ID: Rep_2155_c_0_1254
Type: pfam
Location: 1405883 - 1407130 (-)
Gene ID: Rep_2155_c_0_1255
Type: TC
Location: 1407291 - 1408766 (-)
Gene ID: Rep_2155_c_0_1256
Type: TC
Location: 1409043 - 1410878 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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