Cluster: Rep_2155_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2155
- CGC Family ID: CGCFAM_00185
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2155_c_0 | Rep_2155_c_0_391 | 450137 | 451180 | + | GT2 |
| pfam | Rep_2155_c_0 | Rep_2155_c_0_392 | 451281 | 451928 | - | PAP2 |
| TC | Rep_2155_c_0 | Rep_2155_c_0_393 | 451946 | 453883 | - | 3.A.1.121.4 |
Gene ID: Rep_2155_c_0_391
Type: CAZyme
Location: 450137 - 451180 (+)
Type: CAZyme
Location: 450137 - 451180 (+)
Gene ID: Rep_2155_c_0_392
Type: pfam
Location: 451281 - 451928 (-)
Type: pfam
Location: 451281 - 451928 (-)
Gene ID: Rep_2155_c_0_393
Type: TC
Location: 451946 - 453883 (-)
Type: TC
Location: 451946 - 453883 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp000433075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.