Cluster: Rep_2155_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2155
- CGC Family ID: CGCFAM_00032
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2155_c_0 | Rep_2155_c_0_280 | 298317 | 299756 | + | 9.B.18.1.3 |
| pfam | Rep_2155_c_0 | Rep_2155_c_0_281 | 299922 | 301145 | - | UDPGP |
| CAZyme | Rep_2155_c_0 | Rep_2155_c_0_282 | 301554 | 302288 | - | GT2 |
Gene ID: Rep_2155_c_0_280
Type: TC
Location: 298317 - 299756 (+)
Type: TC
Location: 298317 - 299756 (+)
Gene ID: Rep_2155_c_0_281
Type: pfam
Location: 299922 - 301145 (-)
Type: pfam
Location: 299922 - 301145 (-)
Gene ID: Rep_2155_c_0_282
Type: CAZyme
Location: 301554 - 302288 (-)
Type: CAZyme
Location: 301554 - 302288 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp000433075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.