Cluster: Rep_2155_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2155
- CGC Family ID: CGCFAM_07959
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2155_c_0 | Rep_2155_c_0_97 | 85937 | 86542 | + | 3.A.1.147.6 |
| TC | Rep_2155_c_0 | Rep_2155_c_0_98 | 87007 | 88257 | + | 2.A.23.4.1 |
| NULL(UNKNOWN) | Rep_2155_c_0 | Rep_2155_c_0_99 | 88432 | 89043 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2155_c_0 | Rep_2155_c_0_100 | 89343 | 92453 | + | GH2 |
Gene ID: Rep_2155_c_0_97
Type: TC
Location: 85937 - 86542 (+)
Type: TC
Location: 85937 - 86542 (+)
Gene ID: Rep_2155_c_0_98
Type: TC
Location: 87007 - 88257 (+)
Type: TC
Location: 87007 - 88257 (+)
Gene ID: Rep_2155_c_0_99
Type:
Location: 88432 - 89043 (+)
Type:
Location: 88432 - 89043 (+)
Gene ID: Rep_2155_c_0_100
Type: CAZyme
Location: 89343 - 92453 (+)
Type: CAZyme
Location: 89343 - 92453 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp000433075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.