Cluster: Rep_2155_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2155
- CGC Family ID: CGCFAM_03534
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2155_c_0 | Rep_2155_c_0_2191 | 2455778 | 2457247 | + | GT2 |
| NULL(UNKNOWN) | Rep_2155_c_0 | Rep_2155_c_0_2192 | 2457510 | 2457818 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2155_c_0 | Rep_2155_c_0_2193 | 2457858 | 2459873 | + | 3.A.2.2.2 |
| TC | Rep_2155_c_0 | Rep_2155_c_0_2194 | 2459924 | 2460400 | + | 3.A.2.2.2 |
Gene ID: Rep_2155_c_0_2191
Type: CAZyme
Location: 2455778 - 2457247 (+)
Type: CAZyme
Location: 2455778 - 2457247 (+)
Gene ID: Rep_2155_c_0_2192
Type:
Location: 2457510 - 2457818 (+)
Type:
Location: 2457510 - 2457818 (+)
Gene ID: Rep_2155_c_0_2193
Type: TC
Location: 2457858 - 2459873 (+)
Type: TC
Location: 2457858 - 2459873 (+)
Gene ID: Rep_2155_c_0_2194
Type: TC
Location: 2459924 - 2460400 (+)
Type: TC
Location: 2459924 - 2460400 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp000433075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.