Cluster: Rep_2155_CGC15
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2155
- CGC Family ID: CGCFAM_01430
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2155_c_0 | Rep_2155_c_0_2161 | 2420195 | 2421676 | + | 2.A.22.5.3 |
| pfam | Rep_2155_c_0 | Rep_2155_c_0_2162 | 2421895 | 2422680 | - | ATP_bind_3 |
| TF | Rep_2155_c_0 | Rep_2155_c_0_2163 | 2422897 | 2423652 | + | HTH_AraC | HTH_AraC |
| CAZyme | Rep_2155_c_0 | Rep_2155_c_0_2164 | 2423867 | 2427535 | + | CBM4 | CBM4 | GH16_3 |
Gene ID: Rep_2155_c_0_2161
Type: TC
Location: 2420195 - 2421676 (+)
Type: TC
Location: 2420195 - 2421676 (+)
Gene ID: Rep_2155_c_0_2162
Type: pfam
Location: 2421895 - 2422680 (-)
Type: pfam
Location: 2421895 - 2422680 (-)
Gene ID: Rep_2155_c_0_2163
Type: TF
Location: 2422897 - 2423652 (+)
Type: TF
Location: 2422897 - 2423652 (+)
Gene ID: Rep_2155_c_0_2164
Type: CAZyme
Location: 2423867 - 2427535 (+)
Type: CAZyme
Location: 2423867 - 2427535 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp000433075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.