dbCAN Logo

Cluster: Rep_2155_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2155_c_0 Rep_2155_c_0_2038 2272700 2273692 + 9.B.157.1.1
TC Rep_2155_c_0 Rep_2155_c_0_2039 2273706 2275985 + 3.A.7.16.1
pfam Rep_2155_c_0 Rep_2155_c_0_2040 2276110 2276832 + DZR_2
TC Rep_2155_c_0 Rep_2155_c_0_2041 2276980 2278386 - 3.A.24.3.1
TC Rep_2155_c_0 Rep_2155_c_0_2042 2278460 2279362 - 9.B.28.1.2
pfam Rep_2155_c_0 Rep_2155_c_0_2043 2279579 2280358 + His_biosynth
CAZyme Rep_2155_c_0 Rep_2155_c_0_2044 2280426 2282687 + CBM4 | GH9
pfam Rep_2155_c_0 Rep_2155_c_0_2045 2282700 2285684 + GtrA_DPMS_TM | YfhO
TC Rep_2155_c_0 Rep_2155_c_0_2046 2285789 2287537 + 2.A.21.9.2
Gene ID: Rep_2155_c_0_2038
Type: TC
Location: 2272700 - 2273692 (+)
Gene ID: Rep_2155_c_0_2039
Type: TC
Location: 2273706 - 2275985 (+)
Gene ID: Rep_2155_c_0_2040
Type: pfam
Location: 2276110 - 2276832 (+)
Gene ID: Rep_2155_c_0_2041
Type: TC
Location: 2276980 - 2278386 (-)
Gene ID: Rep_2155_c_0_2042
Type: TC
Location: 2278460 - 2279362 (-)
Gene ID: Rep_2155_c_0_2043
Type: pfam
Location: 2279579 - 2280358 (+)
Gene ID: Rep_2155_c_0_2044
Type: CAZyme
Location: 2280426 - 2282687 (+)
Gene ID: Rep_2155_c_0_2045
Type: pfam
Location: 2282700 - 2285684 (+)
Gene ID: Rep_2155_c_0_2046
Type: TC
Location: 2285789 - 2287537 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List