Cluster: Rep_2155_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2155
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2155_c_0 | Rep_2155_c_0_1901 | 2101783 | 2103696 | + | GH13_9 |
| TC | Rep_2155_c_0 | Rep_2155_c_0_1902 | 2103699 | 2105255 | + | 3.A.1.120.6 |
| pfam | Rep_2155_c_0 | Rep_2155_c_0_1903 | 2105598 | 2107154 | + | MTHFR | S-methyl_trans |
| TC | Rep_2155_c_0 | Rep_2155_c_0_1904 | 2107237 | 2108589 | - | 2.A.66.1.33 |
Gene ID: Rep_2155_c_0_1901
Type: CAZyme
Location: 2101783 - 2103696 (+)
Type: CAZyme
Location: 2101783 - 2103696 (+)
Gene ID: Rep_2155_c_0_1902
Type: TC
Location: 2103699 - 2105255 (+)
Type: TC
Location: 2103699 - 2105255 (+)
Gene ID: Rep_2155_c_0_1903
Type: pfam
Location: 2105598 - 2107154 (+)
Type: pfam
Location: 2105598 - 2107154 (+)
Gene ID: Rep_2155_c_0_1904
Type: TC
Location: 2107237 - 2108589 (-)
Type: TC
Location: 2107237 - 2108589 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Species
Coprococcus sp000433075
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.