Cluster: Rep_2153_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2153
- CGC Family ID: CGCFAM_00032
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2153_c_23 | Rep_2153_c_23_79 | 104354 | 105796 | + | 9.B.18.1.3 |
| NULL(UNKNOWN) | Rep_2153_c_23 | Rep_2153_c_23_80 | 105838 | 106038 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2153_c_23 | Rep_2153_c_23_81 | 106097 | 107317 | - | UDPGP |
| CAZyme | Rep_2153_c_23 | Rep_2153_c_23_82 | 107341 | 108084 | - | GT2 |
Gene ID: Rep_2153_c_23_79
Type: TC
Location: 104354 - 105796 (+)
Type: TC
Location: 104354 - 105796 (+)
Gene ID: Rep_2153_c_23_80
Type:
Location: 105838 - 106038 (+)
Type:
Location: 105838 - 106038 (+)
Gene ID: Rep_2153_c_23_81
Type: pfam
Location: 106097 - 107317 (-)
Type: pfam
Location: 106097 - 107317 (-)
Gene ID: Rep_2153_c_23_82
Type: CAZyme
Location: 107341 - 108084 (-)
Type: CAZyme
Location: 107341 - 108084 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.