Cluster: Rep_2153_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2153
- CGC Family ID: CGCFAM_00075
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2153_c_23 | Rep_2153_c_23_12 | 10912 | 12360 | + | GH1 |
| STP | Rep_2153_c_23 | Rep_2153_c_23_13 | 12418 | 13260 | + | PfkB |
| TC | Rep_2153_c_23 | Rep_2153_c_23_14 | 13485 | 16055 | + | 3.A.9.1.2 |
Gene ID: Rep_2153_c_23_12
Type: CAZyme
Location: 10912 - 12360 (+)
Type: CAZyme
Location: 10912 - 12360 (+)
Gene ID: Rep_2153_c_23_13
Type: STP
Location: 12418 - 13260 (+)
Type: STP
Location: 12418 - 13260 (+)
Gene ID: Rep_2153_c_23_14
Type: TC
Location: 13485 - 16055 (+)
Type: TC
Location: 13485 - 16055 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.