Cluster: Rep_2153_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2153
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2153_c_13 | Rep_2153_c_13_37 | 36676 | 39072 | + | GH94 |
| peptidase | Rep_2153_c_13 | Rep_2153_c_13_38 | 39169 | 39864 | + | S14.UPW |
| pfam | Rep_2153_c_13 | Rep_2153_c_13_39 | 39934 | 40809 | + | BacA |
| TC | Rep_2153_c_13 | Rep_2153_c_13_40 | 40819 | 43494 | + | 3.A.12.1.1 |
Gene ID: Rep_2153_c_13_37
Type: CAZyme
Location: 36676 - 39072 (+)
Type: CAZyme
Location: 36676 - 39072 (+)
Gene ID: Rep_2153_c_13_38
Type: peptidase
Location: 39169 - 39864 (+)
Type: peptidase
Location: 39169 - 39864 (+)
Gene ID: Rep_2153_c_13_39
Type: pfam
Location: 39934 - 40809 (+)
Type: pfam
Location: 39934 - 40809 (+)
Gene ID: Rep_2153_c_13_40
Type: TC
Location: 40819 - 43494 (+)
Type: TC
Location: 40819 - 43494 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.