Cluster: Rep_2153_CGC21
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2153
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2153_c_49 | Rep_2153_c_49_50 | 52255 | 53655 | - | 2.A.49.9.2 |
| TC | Rep_2153_c_49 | Rep_2153_c_49_51 | 53843 | 54865 | + | 9.A.11.1.1 |
| pfam | Rep_2153_c_49 | Rep_2153_c_49_52 | 54870 | 55226 | + | SpoVAC_SpoVAEB |
| CAZyme | Rep_2153_c_49 | Rep_2153_c_49_53 | 55356 | 58304 | - | GT51 |
Gene ID: Rep_2153_c_49_50
Type: TC
Location: 52255 - 53655 (-)
Type: TC
Location: 52255 - 53655 (-)
Gene ID: Rep_2153_c_49_51
Type: TC
Location: 53843 - 54865 (+)
Type: TC
Location: 53843 - 54865 (+)
Gene ID: Rep_2153_c_49_52
Type: pfam
Location: 54870 - 55226 (+)
Type: pfam
Location: 54870 - 55226 (+)
Gene ID: Rep_2153_c_49_53
Type: CAZyme
Location: 55356 - 58304 (-)
Type: CAZyme
Location: 55356 - 58304 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.