Cluster: Rep_2153_CGC16
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2153
- CGC Family ID: CGCFAM_06096
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2153_c_37 | Rep_2153_c_37_13 | 14106 | 14951 | - | GH16_3 |
| CAZyme | Rep_2153_c_37 | Rep_2153_c_37_14 | 15029 | 18424 | - | CBM4 | CBM4 | CBM4 | CBM4 | GH16_3 |
| TC | Rep_2153_c_37 | Rep_2153_c_37_15 | 18634 | 19527 | - | 2.A.115.1.1 |
Gene ID: Rep_2153_c_37_13
Type: CAZyme
Location: 14106 - 14951 (-)
Type: CAZyme
Location: 14106 - 14951 (-)
Gene ID: Rep_2153_c_37_14
Type: CAZyme
Location: 15029 - 18424 (-)
Type: CAZyme
Location: 15029 - 18424 (-)
Gene ID: Rep_2153_c_37_15
Type: TC
Location: 18634 - 19527 (-)
Type: TC
Location: 18634 - 19527 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.