Cluster: Rep_2153_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2153
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2153_c_36 | Rep_2153_c_36_8 | 6264 | 7598 | - | GH32 |
| pfam | Rep_2153_c_36 | Rep_2153_c_36_9 | 7666 | 8757 | - | Exo_endo_phos |
| TC | Rep_2153_c_36 | Rep_2153_c_36_10 | 8858 | 11122 | - | 2.A.16.2.2 |
Gene ID: Rep_2153_c_36_8
Type: CAZyme
Location: 6264 - 7598 (-)
Type: CAZyme
Location: 6264 - 7598 (-)
Gene ID: Rep_2153_c_36_9
Type: pfam
Location: 7666 - 8757 (-)
Type: pfam
Location: 7666 - 8757 (-)
Gene ID: Rep_2153_c_36_10
Type: TC
Location: 8858 - 11122 (-)
Type: TC
Location: 8858 - 11122 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.