Cluster: Rep_2153_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2153
- CGC Family ID: CGCFAM_00505
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2153_c_34 | Rep_2153_c_34_49 | 52317 | 53411 | + | GT4 |
| pfam | Rep_2153_c_34 | Rep_2153_c_34_50 | 53451 | 54281 | + | LicD |
| CAZyme | Rep_2153_c_34 | Rep_2153_c_34_51 | 54278 | 55492 | + | GT4 |
| pfam | Rep_2153_c_34 | Rep_2153_c_34_52 | 55511 | 56677 | + | Wzy_C |
| TC | Rep_2153_c_34 | Rep_2153_c_34_53 | 56810 | 58216 | + | 2.A.66.2.10 |
Gene ID: Rep_2153_c_34_49
Type: CAZyme
Location: 52317 - 53411 (+)
Type: CAZyme
Location: 52317 - 53411 (+)
Gene ID: Rep_2153_c_34_50
Type: pfam
Location: 53451 - 54281 (+)
Type: pfam
Location: 53451 - 54281 (+)
Gene ID: Rep_2153_c_34_51
Type: CAZyme
Location: 54278 - 55492 (+)
Type: CAZyme
Location: 54278 - 55492 (+)
Gene ID: Rep_2153_c_34_52
Type: pfam
Location: 55511 - 56677 (+)
Type: pfam
Location: 55511 - 56677 (+)
Gene ID: Rep_2153_c_34_53
Type: TC
Location: 56810 - 58216 (+)
Type: TC
Location: 56810 - 58216 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.