Cluster: Rep_2153_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2153
- CGC Family ID: CGCFAM_00775
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2153_c_33 | Rep_2153_c_33_163 | 153530 | 158293 | + | GH9 |
| pfam | Rep_2153_c_33 | Rep_2153_c_33_164 | 158494 | 158850 | + | UPF0122 |
| TC | Rep_2153_c_33 | Rep_2153_c_33_165 | 158960 | 160303 | + | 3.A.5.1.1 |
Gene ID: Rep_2153_c_33_163
Type: CAZyme
Location: 153530 - 158293 (+)
Type: CAZyme
Location: 153530 - 158293 (+)
Gene ID: Rep_2153_c_33_164
Type: pfam
Location: 158494 - 158850 (+)
Type: pfam
Location: 158494 - 158850 (+)
Gene ID: Rep_2153_c_33_165
Type: TC
Location: 158960 - 160303 (+)
Type: TC
Location: 158960 - 160303 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.