Cluster: Rep_2153_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2153
- CGC Family ID: CGCFAM_00086
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2153_c_0 | Rep_2153_c_0_27 | 23921 | 25810 | + | 3.A.16.1.1 |
| pfam | Rep_2153_c_0 | Rep_2153_c_0_28 | 25829 | 27172 | + | Lipase_2 | DUF676 |
| CAZyme | Rep_2153_c_0 | Rep_2153_c_0_29 | 27620 | 29716 | + | CBM34 | GH13_39 |
Gene ID: Rep_2153_c_0_27
Type: TC
Location: 23921 - 25810 (+)
Type: TC
Location: 23921 - 25810 (+)
Gene ID: Rep_2153_c_0_28
Type: pfam
Location: 25829 - 27172 (+)
Type: pfam
Location: 25829 - 27172 (+)
Gene ID: Rep_2153_c_0_29
Type: CAZyme
Location: 27620 - 29716 (+)
Type: CAZyme
Location: 27620 - 29716 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Coprococcus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.