Cluster: Rep_2152_CGC8
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2152
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2152_c_59 | Rep_2152_c_59_2 | 1945 | 2712 | + | 3.A.1.115.1 |
| TC | Rep_2152_c_59 | Rep_2152_c_59_3 | 2702 | 4738 | + | 3.A.1.115.2 |
| CAZyme | Rep_2152_c_59 | Rep_2152_c_59_4 | 4845 | 5762 | + | GH25 |
| STP | Rep_2152_c_59 | Rep_2152_c_59_5 | 5781 | 7697 | + | EAL | GGDEF |
| pfam | Rep_2152_c_59 | Rep_2152_c_59_6 | 7700 | 9040 | - | AAA_14 | DUF4143 |
| TC | Rep_2152_c_59 | Rep_2152_c_59_7 | 9270 | 10649 | + | 2.A.86.1.8 |
Gene ID: Rep_2152_c_59_2
Type: TC
Location: 1945 - 2712 (+)
Type: TC
Location: 1945 - 2712 (+)
Gene ID: Rep_2152_c_59_3
Type: TC
Location: 2702 - 4738 (+)
Type: TC
Location: 2702 - 4738 (+)
Gene ID: Rep_2152_c_59_4
Type: CAZyme
Location: 4845 - 5762 (+)
Type: CAZyme
Location: 4845 - 5762 (+)
Gene ID: Rep_2152_c_59_5
Type: STP
Location: 5781 - 7697 (+)
Type: STP
Location: 5781 - 7697 (+)
Gene ID: Rep_2152_c_59_6
Type: pfam
Location: 7700 - 9040 (-)
Type: pfam
Location: 7700 - 9040 (-)
Gene ID: Rep_2152_c_59_7
Type: TC
Location: 9270 - 10649 (+)
Type: TC
Location: 9270 - 10649 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.