Cluster: Rep_2152_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2152
- CGC Family ID: CGCFAM_09406
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2152_c_55 | Rep_2152_c_55_12 | 13178 | 15109 | + | 2.A.67.4.2 |
| pfam | Rep_2152_c_55 | Rep_2152_c_55_13 | 15096 | 15473 | + | PqqD |
| TC | Rep_2152_c_55 | Rep_2152_c_55_14 | 15581 | 16306 | + | 3.A.1.15.1 |
| TC | Rep_2152_c_55 | Rep_2152_c_55_15 | 16307 | 17146 | + | 3.A.1.15.5 |
| pfam | Rep_2152_c_55 | Rep_2152_c_55_16 | 17157 | 17819 | - | Pro_isomerase |
| CAZyme | Rep_2152_c_55 | Rep_2152_c_55_17 | 17843 | 19270 | - | GH1 |
Gene ID: Rep_2152_c_55_12
Type: TC
Location: 13178 - 15109 (+)
Type: TC
Location: 13178 - 15109 (+)
Gene ID: Rep_2152_c_55_13
Type: pfam
Location: 15096 - 15473 (+)
Type: pfam
Location: 15096 - 15473 (+)
Gene ID: Rep_2152_c_55_14
Type: TC
Location: 15581 - 16306 (+)
Type: TC
Location: 15581 - 16306 (+)
Gene ID: Rep_2152_c_55_15
Type: TC
Location: 16307 - 17146 (+)
Type: TC
Location: 16307 - 17146 (+)
Gene ID: Rep_2152_c_55_16
Type: pfam
Location: 17157 - 17819 (-)
Type: pfam
Location: 17157 - 17819 (-)
Gene ID: Rep_2152_c_55_17
Type: CAZyme
Location: 17843 - 19270 (-)
Type: CAZyme
Location: 17843 - 19270 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.