Cluster: Rep_2152_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2152
- CGC Family ID: CGCFAM_05913
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2152_c_35 | Rep_2152_c_35_12 | 8566 | 9732 | + | 2.A.4.7.6 |
| pfam | Rep_2152_c_35 | Rep_2152_c_35_13 | 10090 | 11313 | + | tRNA-synt_1b | S4 | SYY_C-terminal |
| STP | Rep_2152_c_35 | Rep_2152_c_35_14 | 11410 | 12630 | + | Response_reg |
| CAZyme | Rep_2152_c_35 | Rep_2152_c_35_15 | 12703 | 13557 | + | CE4 |
Gene ID: Rep_2152_c_35_12
Type: TC
Location: 8566 - 9732 (+)
Type: TC
Location: 8566 - 9732 (+)
Gene ID: Rep_2152_c_35_13
Type: pfam
Location: 10090 - 11313 (+)
Type: pfam
Location: 10090 - 11313 (+)
Gene ID: Rep_2152_c_35_14
Type: STP
Location: 11410 - 12630 (+)
Type: STP
Location: 11410 - 12630 (+)
Gene ID: Rep_2152_c_35_15
Type: CAZyme
Location: 12703 - 13557 (+)
Type: CAZyme
Location: 12703 - 13557 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.