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Cluster: Rep_2152_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2152_c_23 Rep_2152_c_23_3 2367 3866 + 9.B.145.1.2
CAZyme Rep_2152_c_23 Rep_2152_c_23_4 4209 6689 + GT2 | GT2
pfam Rep_2152_c_23 Rep_2152_c_23_5 6725 8758 + DUF2142
CAZyme Rep_2152_c_23 Rep_2152_c_23_6 8792 10663 + GT2 | GT2
TC Rep_2152_c_23 Rep_2152_c_23_7 10677 12149 - 3.A.24.3.1
pfam Rep_2152_c_23 Rep_2152_c_23_8 12414 13193 + His_biosynth
CAZyme Rep_2152_c_23 Rep_2152_c_23_9 13247 15547 + CBM4 | GH9
pfam Rep_2152_c_23 Rep_2152_c_23_10 15561 18593 + GtrA_DPMS_TM | YfhO
TC Rep_2152_c_23 Rep_2152_c_23_11 18677 20455 + 2.A.21.9.2
Gene ID: Rep_2152_c_23_3
Type: TC
Location: 2367 - 3866 (+)
Gene ID: Rep_2152_c_23_4
Type: CAZyme
Location: 4209 - 6689 (+)
Gene ID: Rep_2152_c_23_5
Type: pfam
Location: 6725 - 8758 (+)
Gene ID: Rep_2152_c_23_6
Type: CAZyme
Location: 8792 - 10663 (+)
Gene ID: Rep_2152_c_23_7
Type: TC
Location: 10677 - 12149 (-)
Gene ID: Rep_2152_c_23_8
Type: pfam
Location: 12414 - 13193 (+)
Gene ID: Rep_2152_c_23_9
Type: CAZyme
Location: 13247 - 15547 (+)
Gene ID: Rep_2152_c_23_10
Type: pfam
Location: 15561 - 18593 (+)
Gene ID: Rep_2152_c_23_11
Type: TC
Location: 18677 - 20455 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Wujia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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