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Cluster: Rep_2152_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2152_c_9 Rep_2152_c_9_26 26388 27341 + 2.A.19.5.2
TF Rep_2152_c_9 Rep_2152_c_9_27 27461 27784 + HTH_3
STP Rep_2152_c_9 Rep_2152_c_9_28 28028 28633 + TetR_N
TC Rep_2152_c_9 Rep_2152_c_9_29 28658 29500 + 8.A.5.1.6
pfam Rep_2152_c_9 Rep_2152_c_9_30 29624 30385 + DUF1779
peptidase Rep_2152_c_9 Rep_2152_c_9_31 30496 31371 + M24.UPA
CAZyme Rep_2152_c_9 Rep_2152_c_9_32 31458 34364 + GH3
pfam Rep_2152_c_9 Rep_2152_c_9_33 34429 34902 + PrcB_C
CAZyme Rep_2152_c_9 Rep_2152_c_9_34 34992 36542 + CBM50
Gene ID: Rep_2152_c_9_26
Type: TC
Location: 26388 - 27341 (+)
Gene ID: Rep_2152_c_9_27
Type: TF
Location: 27461 - 27784 (+)
Gene ID: Rep_2152_c_9_28
Type: STP
Location: 28028 - 28633 (+)
Gene ID: Rep_2152_c_9_29
Type: TC
Location: 28658 - 29500 (+)
Gene ID: Rep_2152_c_9_30
Type: pfam
Location: 29624 - 30385 (+)
Gene ID: Rep_2152_c_9_31
Type: peptidase
Location: 30496 - 31371 (+)
Gene ID: Rep_2152_c_9_32
Type: CAZyme
Location: 31458 - 34364 (+)
Gene ID: Rep_2152_c_9_33
Type: pfam
Location: 34429 - 34902 (+)
Gene ID: Rep_2152_c_9_34
Type: CAZyme
Location: 34992 - 36542 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Wujia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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