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Cluster: Rep_2152_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme Rep_2152_c_88 Rep_2152_c_88_21 16322 17341 + GT2
pfam Rep_2152_c_88 Rep_2152_c_88_22 17586 18218 - PAP2 | PAP2_3
TF Rep_2152_c_88 Rep_2152_c_88_23 18444 18908 + MarR
TC Rep_2152_c_88 Rep_2152_c_88_24 18918 20246 + 2.A.66.1.37
TC Rep_2152_c_88 Rep_2152_c_88_25 20450 22207 + 3.A.1.135.6
TC Rep_2152_c_88 Rep_2152_c_88_26 22207 24051 + 3.A.1.135.6
pfam Rep_2152_c_88 Rep_2152_c_88_27 24081 25118 + 2-Hacid_dh | 2-Hacid_dh_C
pfam Rep_2152_c_88 Rep_2152_c_88_28 25277 25567 + Ribosomal_S6
TC Rep_2152_c_88 Rep_2152_c_88_29 25590 26045 + 3.A.7.19.1
Gene ID: Rep_2152_c_88_21
Type: CAZyme
Location: 16322 - 17341 (+)
Gene ID: Rep_2152_c_88_22
Type: pfam
Location: 17586 - 18218 (-)
Gene ID: Rep_2152_c_88_23
Type: TF
Location: 18444 - 18908 (+)
Gene ID: Rep_2152_c_88_24
Type: TC
Location: 18918 - 20246 (+)
Gene ID: Rep_2152_c_88_25
Type: TC
Location: 20450 - 22207 (+)
Gene ID: Rep_2152_c_88_26
Type: TC
Location: 22207 - 24051 (+)
Gene ID: Rep_2152_c_88_27
Type: pfam
Location: 24081 - 25118 (+)
Gene ID: Rep_2152_c_88_28
Type: pfam
Location: 25277 - 25567 (+)
Gene ID: Rep_2152_c_88_29
Type: TC
Location: 25590 - 26045 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Wujia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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