Cluster: Rep_2148_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2148
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2148_c_0 | Rep_2148_c_0_940 | 988965 | 989933 | - | 1.B.52.2.1 |
| STP | Rep_2148_c_0 | Rep_2148_c_0_941 | 989958 | 991040 | - | FIST |
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_942 | 991266 | 994160 | + | GT51 |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_943 | 994242 | 994601 | - | SpoVAC_SpoVAEB |
| TC | Rep_2148_c_0 | Rep_2148_c_0_944 | 994618 | 995676 | - | 9.A.11.1.1 |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_945 | 995704 | 996156 | - | SpoVAC_SpoVAEB |
| TC | Rep_2148_c_0 | Rep_2148_c_0_946 | 996181 | 996600 | - | 9.A.11.1.1 |
Gene ID: Rep_2148_c_0_940
Type: TC
Location: 988965 - 989933 (-)
Type: TC
Location: 988965 - 989933 (-)
Gene ID: Rep_2148_c_0_941
Type: STP
Location: 989958 - 991040 (-)
Type: STP
Location: 989958 - 991040 (-)
Gene ID: Rep_2148_c_0_942
Type: CAZyme
Location: 991266 - 994160 (+)
Type: CAZyme
Location: 991266 - 994160 (+)
Gene ID: Rep_2148_c_0_943
Type: pfam
Location: 994242 - 994601 (-)
Type: pfam
Location: 994242 - 994601 (-)
Gene ID: Rep_2148_c_0_944
Type: TC
Location: 994618 - 995676 (-)
Type: TC
Location: 994618 - 995676 (-)
Gene ID: Rep_2148_c_0_945
Type: pfam
Location: 995704 - 996156 (-)
Type: pfam
Location: 995704 - 996156 (-)
Gene ID: Rep_2148_c_0_946
Type: TC
Location: 996181 - 996600 (-)
Type: TC
Location: 996181 - 996600 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Species
Wujia chipingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.