Cluster: Rep_2148_CGC7
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: Rep_2148
- CGC Family ID: CGCFAM_02067
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2148_c_0 | Rep_2148_c_0_582 | 603194 | 603820 | + | 3.A.1.1.16 |
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_583 | 603992 | 606685 | + | GH94 |
| NULL(UNKNOWN) | Rep_2148_c_0 | Rep_2148_c_0_584 | 606699 | 607100 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_585 | 607377 | 610475 | + | GH161 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_586 | 610597 | 612087 | + | 9.B.10.1.1 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_587 | 612193 | 613551 | + | 9.B.18.1.1 |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_588 | 613563 | 614279 | + | IspD | NTP_transf_3 |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_589 | 614291 | 615358 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| TC | Rep_2148_c_0 | Rep_2148_c_0_590 | 615377 | 616153 | + | 3.A.1.103.1 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_591 | 616172 | 616921 | + | 3.A.1.103.5 |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_592 | 616923 | 618074 | + | Glyphos_transf |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_593 | 618055 | 619320 | + | Glyphos_transf |
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_594 | 619323 | 620081 | + | GT2 |
Gene ID: Rep_2148_c_0_582
Type: TC
Location: 603194 - 603820 (+)
Type: TC
Location: 603194 - 603820 (+)
Gene ID: Rep_2148_c_0_583
Type: CAZyme
Location: 603992 - 606685 (+)
Type: CAZyme
Location: 603992 - 606685 (+)
Gene ID: Rep_2148_c_0_584
Type:
Location: 606699 - 607100 (+)
Type:
Location: 606699 - 607100 (+)
Gene ID: Rep_2148_c_0_585
Type: CAZyme
Location: 607377 - 610475 (+)
Type: CAZyme
Location: 607377 - 610475 (+)
Gene ID: Rep_2148_c_0_586
Type: TC
Location: 610597 - 612087 (+)
Type: TC
Location: 610597 - 612087 (+)
Gene ID: Rep_2148_c_0_587
Type: TC
Location: 612193 - 613551 (+)
Type: TC
Location: 612193 - 613551 (+)
Gene ID: Rep_2148_c_0_588
Type: pfam
Location: 613563 - 614279 (+)
Type: pfam
Location: 613563 - 614279 (+)
Gene ID: Rep_2148_c_0_589
Type: pfam
Location: 614291 - 615358 (+)
Type: pfam
Location: 614291 - 615358 (+)
Gene ID: Rep_2148_c_0_590
Type: TC
Location: 615377 - 616153 (+)
Type: TC
Location: 615377 - 616153 (+)
Gene ID: Rep_2148_c_0_591
Type: TC
Location: 616172 - 616921 (+)
Type: TC
Location: 616172 - 616921 (+)
Gene ID: Rep_2148_c_0_592
Type: pfam
Location: 616923 - 618074 (+)
Type: pfam
Location: 616923 - 618074 (+)
Gene ID: Rep_2148_c_0_593
Type: pfam
Location: 618055 - 619320 (+)
Type: pfam
Location: 618055 - 619320 (+)
Gene ID: Rep_2148_c_0_594
Type: CAZyme
Location: 619323 - 620081 (+)
Type: CAZyme
Location: 619323 - 620081 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Species
Wujia chipingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.