Cluster: Rep_2148_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2148
- CGC Family ID: CGCFAM_10742
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2148_c_0 | Rep_2148_c_0_571 | 588665 | 589987 | + | 2.A.66.1.28 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_572 | 590392 | 592773 | + | 3.A.3.23.2 |
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_573 | 592903 | 595755 | + | GH73 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_574 | 595841 | 596440 | - | 2.A.115.2.14 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_575 | 596533 | 598434 | + | 2.A.67.4.2 |
| STP | Rep_2148_c_0 | Rep_2148_c_0_576 | 598513 | 598734 | + | HMA |
| TC | Rep_2148_c_0 | Rep_2148_c_0_577 | 598806 | 600674 | + | 3.A.3.6.10 |
Gene ID: Rep_2148_c_0_571
Type: TC
Location: 588665 - 589987 (+)
Type: TC
Location: 588665 - 589987 (+)
Gene ID: Rep_2148_c_0_572
Type: TC
Location: 590392 - 592773 (+)
Type: TC
Location: 590392 - 592773 (+)
Gene ID: Rep_2148_c_0_573
Type: CAZyme
Location: 592903 - 595755 (+)
Type: CAZyme
Location: 592903 - 595755 (+)
Gene ID: Rep_2148_c_0_574
Type: TC
Location: 595841 - 596440 (-)
Type: TC
Location: 595841 - 596440 (-)
Gene ID: Rep_2148_c_0_575
Type: TC
Location: 596533 - 598434 (+)
Type: TC
Location: 596533 - 598434 (+)
Gene ID: Rep_2148_c_0_576
Type: STP
Location: 598513 - 598734 (+)
Type: STP
Location: 598513 - 598734 (+)
Gene ID: Rep_2148_c_0_577
Type: TC
Location: 598806 - 600674 (+)
Type: TC
Location: 598806 - 600674 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Species
Wujia chipingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.