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Cluster: Rep_2148_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2148_c_0 Rep_2148_c_0_229 233879 234712 + 3.A.1.104.1
TC Rep_2148_c_0 Rep_2148_c_0_230 234731 236044 + 3.A.1.103.6
pfam Rep_2148_c_0 Rep_2148_c_0_231 236032 236949 + RrnaAD | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
NULL(UNKNOWN) Rep_2148_c_0 Rep_2148_c_0_232 236951 238189 + NULL(UNKNOWN)
[View Structural Homologs]
TC Rep_2148_c_0 Rep_2148_c_0_233 238179 239582 + 9.B.18.1.2
pfam Rep_2148_c_0 Rep_2148_c_0_234 239590 240666 + DUF6077
CAZyme Rep_2148_c_0 Rep_2148_c_0_235 240695 241525 + GT111
NULL(UNKNOWN) Rep_2148_c_0 Rep_2148_c_0_236 241546 243120 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme Rep_2148_c_0 Rep_2148_c_0_237 243136 244125 + GT2
Gene ID: Rep_2148_c_0_229
Type: TC
Location: 233879 - 234712 (+)
Gene ID: Rep_2148_c_0_230
Type: TC
Location: 234731 - 236044 (+)
Gene ID: Rep_2148_c_0_231
Type: pfam
Location: 236032 - 236949 (+)
Gene ID: Rep_2148_c_0_232
Type:
Location: 236951 - 238189 (+)
Gene ID: Rep_2148_c_0_233
Type: TC
Location: 238179 - 239582 (+)
Gene ID: Rep_2148_c_0_234
Type: pfam
Location: 239590 - 240666 (+)
Gene ID: Rep_2148_c_0_235
Type: CAZyme
Location: 240695 - 241525 (+)
Gene ID: Rep_2148_c_0_236
Type:
Location: 241546 - 243120 (+)
Gene ID: Rep_2148_c_0_237
Type: CAZyme
Location: 243136 - 244125 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Wujia
→
Species
Wujia chipingensis

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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