dbCAN Logo

Cluster: Rep_2148_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC Rep_2148_c_0 Rep_2148_c_0_2871 3025109 3026875 - 2.A.21.9.2
pfam Rep_2148_c_0 Rep_2148_c_0_2872 3026908 3029976 - GtrA_DPMS_TM | YfhO
CAZyme Rep_2148_c_0 Rep_2148_c_0_2873 3030000 3032297 - CBM4 | GH9
pfam Rep_2148_c_0 Rep_2148_c_0_2874 3032357 3033130 - His_biosynth
TC Rep_2148_c_0 Rep_2148_c_0_2875 3033818 3035284 + 3.A.24.3.1
CAZyme Rep_2148_c_0 Rep_2148_c_0_2876 3035270 3037198 - GT2
CAZyme Rep_2148_c_0 Rep_2148_c_0_2877 3037220 3039010 - GT2 | GT2
TC Rep_2148_c_0 Rep_2148_c_0_2878 3039306 3040754 - 2.A.38.1.1
TC Rep_2148_c_0 Rep_2148_c_0_2879 3040779 3042176 - 2.A.38.1.1
Gene ID: Rep_2148_c_0_2871
Type: TC
Location: 3025109 - 3026875 (-)
Gene ID: Rep_2148_c_0_2872
Type: pfam
Location: 3026908 - 3029976 (-)
Gene ID: Rep_2148_c_0_2873
Type: CAZyme
Location: 3030000 - 3032297 (-)
Gene ID: Rep_2148_c_0_2874
Type: pfam
Location: 3032357 - 3033130 (-)
Gene ID: Rep_2148_c_0_2875
Type: TC
Location: 3033818 - 3035284 (+)
Gene ID: Rep_2148_c_0_2876
Type: CAZyme
Location: 3035270 - 3037198 (-)
Gene ID: Rep_2148_c_0_2877
Type: CAZyme
Location: 3037220 - 3039010 (-)
Gene ID: Rep_2148_c_0_2878
Type: TC
Location: 3039306 - 3040754 (-)
Gene ID: Rep_2148_c_0_2879
Type: TC
Location: 3040779 - 3042176 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Wujia
→
Species
Wujia chipingensis

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List