Cluster: Rep_2148_CGC23
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2148
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2148_c_0 | Rep_2148_c_0_2482 | 2649498 | 2650880 | - | 2.A.86.1.8 |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_2483 | 2651023 | 2652294 | + | AAA_14 | DUF4143 |
| STP | Rep_2148_c_0 | Rep_2148_c_0_2484 | 2652296 | 2654209 | - | EAL | GGDEF |
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_2485 | 2654225 | 2655220 | - | GH25 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_2486 | 2655254 | 2657290 | - | 3.A.1.115.2 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_2487 | 2657287 | 2658051 | - | 3.A.1.115.1 |
Gene ID: Rep_2148_c_0_2482
Type: TC
Location: 2649498 - 2650880 (-)
Type: TC
Location: 2649498 - 2650880 (-)
Gene ID: Rep_2148_c_0_2483
Type: pfam
Location: 2651023 - 2652294 (+)
Type: pfam
Location: 2651023 - 2652294 (+)
Gene ID: Rep_2148_c_0_2484
Type: STP
Location: 2652296 - 2654209 (-)
Type: STP
Location: 2652296 - 2654209 (-)
Gene ID: Rep_2148_c_0_2485
Type: CAZyme
Location: 2654225 - 2655220 (-)
Type: CAZyme
Location: 2654225 - 2655220 (-)
Gene ID: Rep_2148_c_0_2486
Type: TC
Location: 2655254 - 2657290 (-)
Type: TC
Location: 2655254 - 2657290 (-)
Gene ID: Rep_2148_c_0_2487
Type: TC
Location: 2657287 - 2658051 (-)
Type: TC
Location: 2657287 - 2658051 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Species
Wujia chipingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.