Cluster: Rep_2148_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: Rep_2148
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_2390 | 2557494 | 2558990 | - | GH77 |
| TF | Rep_2148_c_0 | Rep_2148_c_0_2391 | 2559023 | 2560027 | - | LacI |
| TC | Rep_2148_c_0 | Rep_2148_c_0_2392 | 2560059 | 2560892 | - | 3.A.1.1.45 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_2393 | 2560892 | 2561734 | - | 3.A.1.1.45 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_2394 | 2561833 | 2563164 | - | 3.A.1.1.45 |
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_2395 | 2563405 | 2565663 | - | GT35 |
Gene ID: Rep_2148_c_0_2390
Type: CAZyme
Location: 2557494 - 2558990 (-)
Type: CAZyme
Location: 2557494 - 2558990 (-)
Gene ID: Rep_2148_c_0_2391
Type: TF
Location: 2559023 - 2560027 (-)
Type: TF
Location: 2559023 - 2560027 (-)
Gene ID: Rep_2148_c_0_2392
Type: TC
Location: 2560059 - 2560892 (-)
Type: TC
Location: 2560059 - 2560892 (-)
Gene ID: Rep_2148_c_0_2393
Type: TC
Location: 2560892 - 2561734 (-)
Type: TC
Location: 2560892 - 2561734 (-)
Gene ID: Rep_2148_c_0_2394
Type: TC
Location: 2561833 - 2563164 (-)
Type: TC
Location: 2561833 - 2563164 (-)
Gene ID: Rep_2148_c_0_2395
Type: CAZyme
Location: 2563405 - 2565663 (-)
Type: CAZyme
Location: 2563405 - 2565663 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Species
Wujia chipingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.