Cluster: Rep_2148_CGC20
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2148
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2148_c_0 | Rep_2148_c_0_2373 | 2534010 | 2535395 | - | 2.A.2.3.2 |
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_2374 | 2535412 | 2538450 | - | GH2 |
| TF | Rep_2148_c_0 | Rep_2148_c_0_2375 | 2538697 | 2539560 | + | HTH_AraC | HTH_AraC |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_2376 | 2539568 | 2540251 | - | DUF6553 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_2377 | 2540281 | 2541324 | - | 3.A.1.2.3 |
| STP | Rep_2148_c_0 | Rep_2148_c_0_2378 | 2541317 | 2542291 | - | Peripla_BP_1 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_2379 | 2542278 | 2544161 | - | 8.A.59.2.1 |
| TF | Rep_2148_c_0 | Rep_2148_c_0_2380 | 2544198 | 2545814 | - | HTH_AraC | HTH_AraC |
| TC | Rep_2148_c_0 | Rep_2148_c_0_2381 | 2546298 | 2547950 | - | 3.A.1.2.3 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_2382 | 2547969 | 2549477 | - | 3.A.1.2.3 |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_2383 | 2549570 | 2550832 | - | Peripla_BP_4 | Peripla_BP_7 |
| NULL(UNKNOWN) | Rep_2148_c_0 | Rep_2148_c_0_2384 | 2551140 | 2552093 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2148_c_0 | Rep_2148_c_0_2385 | 2552169 | 2553725 | - | 3.A.1.120.6 |
Gene ID: Rep_2148_c_0_2373
Type: TC
Location: 2534010 - 2535395 (-)
Type: TC
Location: 2534010 - 2535395 (-)
Gene ID: Rep_2148_c_0_2374
Type: CAZyme
Location: 2535412 - 2538450 (-)
Type: CAZyme
Location: 2535412 - 2538450 (-)
Gene ID: Rep_2148_c_0_2375
Type: TF
Location: 2538697 - 2539560 (+)
Type: TF
Location: 2538697 - 2539560 (+)
Gene ID: Rep_2148_c_0_2376
Type: pfam
Location: 2539568 - 2540251 (-)
Type: pfam
Location: 2539568 - 2540251 (-)
Gene ID: Rep_2148_c_0_2377
Type: TC
Location: 2540281 - 2541324 (-)
Type: TC
Location: 2540281 - 2541324 (-)
Gene ID: Rep_2148_c_0_2378
Type: STP
Location: 2541317 - 2542291 (-)
Type: STP
Location: 2541317 - 2542291 (-)
Gene ID: Rep_2148_c_0_2379
Type: TC
Location: 2542278 - 2544161 (-)
Type: TC
Location: 2542278 - 2544161 (-)
Gene ID: Rep_2148_c_0_2380
Type: TF
Location: 2544198 - 2545814 (-)
Type: TF
Location: 2544198 - 2545814 (-)
Gene ID: Rep_2148_c_0_2381
Type: TC
Location: 2546298 - 2547950 (-)
Type: TC
Location: 2546298 - 2547950 (-)
Gene ID: Rep_2148_c_0_2382
Type: TC
Location: 2547969 - 2549477 (-)
Type: TC
Location: 2547969 - 2549477 (-)
Gene ID: Rep_2148_c_0_2383
Type: pfam
Location: 2549570 - 2550832 (-)
Type: pfam
Location: 2549570 - 2550832 (-)
Gene ID: Rep_2148_c_0_2384
Type:
Location: 2551140 - 2552093 (-)
Type:
Location: 2551140 - 2552093 (-)
Gene ID: Rep_2148_c_0_2385
Type: TC
Location: 2552169 - 2553725 (-)
Type: TC
Location: 2552169 - 2553725 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Species
Wujia chipingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.