Cluster: Rep_2148_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2148
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2148_c_0 | Rep_2148_c_0_2278 | 2434338 | 2434970 | - | 2.A.115.2.14 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_2279 | 2435025 | 2435774 | - | 3.A.1.3.20 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_2280 | 2435787 | 2436557 | - | 3.A.1.3.20 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_2281 | 2436638 | 2437501 | - | 3.A.1.3.20 |
| STP | Rep_2148_c_0 | Rep_2148_c_0_2282 | 2437862 | 2438341 | - | HD |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_2283 | 2438325 | 2439656 | - | Mur_ligase_C | Mur_ligase_M |
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_2284 | 2439657 | 2440733 | - | CE4 |
Gene ID: Rep_2148_c_0_2278
Type: TC
Location: 2434338 - 2434970 (-)
Type: TC
Location: 2434338 - 2434970 (-)
Gene ID: Rep_2148_c_0_2279
Type: TC
Location: 2435025 - 2435774 (-)
Type: TC
Location: 2435025 - 2435774 (-)
Gene ID: Rep_2148_c_0_2280
Type: TC
Location: 2435787 - 2436557 (-)
Type: TC
Location: 2435787 - 2436557 (-)
Gene ID: Rep_2148_c_0_2281
Type: TC
Location: 2436638 - 2437501 (-)
Type: TC
Location: 2436638 - 2437501 (-)
Gene ID: Rep_2148_c_0_2282
Type: STP
Location: 2437862 - 2438341 (-)
Type: STP
Location: 2437862 - 2438341 (-)
Gene ID: Rep_2148_c_0_2283
Type: pfam
Location: 2438325 - 2439656 (-)
Type: pfam
Location: 2438325 - 2439656 (-)
Gene ID: Rep_2148_c_0_2284
Type: CAZyme
Location: 2439657 - 2440733 (-)
Type: CAZyme
Location: 2439657 - 2440733 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Species
Wujia chipingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.