Cluster: Rep_2148_CGC14
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2148
- CGC Family ID: CGCFAM_01839
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | Rep_2148_c_0 | Rep_2148_c_0_1872 | 2011550 | 2012380 | - | 9.A.40.1.2 |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_1873 | 2012398 | 2012739 | - | PemK_toxin |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_1874 | 2012839 | 2014347 | - | Carb_kinase | YjeF_N |
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_1875 | 2014514 | 2015590 | + | GH23 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_1876 | 2015802 | 2018369 | - | 3.A.1.211.18 |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_1877 | 2018445 | 2019668 | - | Tubulin | FtsZ_C |
| NULL(UNKNOWN) | Rep_2148_c_0 | Rep_2148_c_0_1878 | 2019760 | 2020461 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | Rep_2148_c_0 | Rep_2148_c_0_1879 | 2020498 | 2021661 | - | 2.A.103.1.3 |
| NULL(UNKNOWN) | Rep_2148_c_0 | Rep_2148_c_0_1880 | 2021627 | 2021716 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_1881 | 2021703 | 2023070 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | Rep_2148_c_0 | Rep_2148_c_0_1882 | 2023104 | 2024054 | - | 9.B.146.1.6 |
Gene ID: Rep_2148_c_0_1872
Type: TC
Location: 2011550 - 2012380 (-)
Type: TC
Location: 2011550 - 2012380 (-)
Gene ID: Rep_2148_c_0_1873
Type: pfam
Location: 2012398 - 2012739 (-)
Type: pfam
Location: 2012398 - 2012739 (-)
Gene ID: Rep_2148_c_0_1874
Type: pfam
Location: 2012839 - 2014347 (-)
Type: pfam
Location: 2012839 - 2014347 (-)
Gene ID: Rep_2148_c_0_1875
Type: CAZyme
Location: 2014514 - 2015590 (+)
Type: CAZyme
Location: 2014514 - 2015590 (+)
Gene ID: Rep_2148_c_0_1876
Type: TC
Location: 2015802 - 2018369 (-)
Type: TC
Location: 2015802 - 2018369 (-)
Gene ID: Rep_2148_c_0_1877
Type: pfam
Location: 2018445 - 2019668 (-)
Type: pfam
Location: 2018445 - 2019668 (-)
Gene ID: Rep_2148_c_0_1878
Type:
Location: 2019760 - 2020461 (-)
Type:
Location: 2019760 - 2020461 (-)
Gene ID: Rep_2148_c_0_1879
Type: TC
Location: 2020498 - 2021661 (-)
Type: TC
Location: 2020498 - 2021661 (-)
Gene ID: Rep_2148_c_0_1880
Type:
Location: 2021627 - 2021716 (-)
Type:
Location: 2021627 - 2021716 (-)
Gene ID: Rep_2148_c_0_1881
Type: pfam
Location: 2021703 - 2023070 (-)
Type: pfam
Location: 2021703 - 2023070 (-)
Gene ID: Rep_2148_c_0_1882
Type: TC
Location: 2023104 - 2024054 (-)
Type: TC
Location: 2023104 - 2024054 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Species
Wujia chipingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.