Cluster: Rep_2148_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: Rep_2148
- CGC Family ID: CGCFAM_01232
- Continent: NA
- Source Study: Leviatan et al., 2022 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | Rep_2148_c_0 | Rep_2148_c_0_1074 | 1152941 | 1155148 | + | CBM48 | GH13_9 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_1075 | 1155248 | 1156099 | + | 1.A.23.2.1 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_1076 | 1156177 | 1157307 | + | 9.B.10.1.1 |
| pfam | Rep_2148_c_0 | Rep_2148_c_0_1077 | 1157352 | 1158314 | + | cobW | DUF1980_C |
| TC | Rep_2148_c_0 | Rep_2148_c_0_1078 | 1158344 | 1159060 | + | 3.A.1.15.8 |
| TC | Rep_2148_c_0 | Rep_2148_c_0_1079 | 1159063 | 1159902 | + | 3.A.1.15.11 |
Gene ID: Rep_2148_c_0_1074
Type: CAZyme
Location: 1152941 - 1155148 (+)
Type: CAZyme
Location: 1152941 - 1155148 (+)
Gene ID: Rep_2148_c_0_1075
Type: TC
Location: 1155248 - 1156099 (+)
Type: TC
Location: 1155248 - 1156099 (+)
Gene ID: Rep_2148_c_0_1076
Type: TC
Location: 1156177 - 1157307 (+)
Type: TC
Location: 1156177 - 1157307 (+)
Gene ID: Rep_2148_c_0_1077
Type: pfam
Location: 1157352 - 1158314 (+)
Type: pfam
Location: 1157352 - 1158314 (+)
Gene ID: Rep_2148_c_0_1078
Type: TC
Location: 1158344 - 1159060 (+)
Type: TC
Location: 1158344 - 1159060 (+)
Gene ID: Rep_2148_c_0_1079
Type: TC
Location: 1159063 - 1159902 (+)
Type: TC
Location: 1159063 - 1159902 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Wujia
Species
Wujia chipingensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.